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水谷紗弥佳日本学術振興会特別研究員PD 〒152-8550 東京都目黒区大岡山2-12-1 M6-4 |
Education
- 2003 – 2006
- University of California, Los Angeles, Department of Molecular, Cell and Developmental Biology（Bachelor of Science）
- 2007 – 2009
- 京都大学理学研究科生物科学専攻生物物理学系 金久研究室（修士）
- 2009 – 2015
- 京都大学理学研究科生物科学専攻生物物理学系 五斗・緒方研究室（博士）
Degree
博士（理学）
Work Experience
- 2015 – 2016
- 東京工業大学生命理工学研究科（黒川・中島・山田研究室）
- 研究員
- 2016 – present
- 東京工業大学生命理工学院（山田研究室）
- 日本学術振興会特別研究員PD
Publications
- Nishimoto Y, Mizutani S, Nakajima T, Hosoda F, Watanabe H, Saito Y, Shibata T, Yachida S, Yamada T
High stability of faecal microbiome composition in guanidine thiocyanate solution at room temperature and robustness during colonoscopy.
Gut, 65(9), 1574-5 (2016).
[paper]
- Hiroaki Iwata, Ryusuke Sawada, Sayaka Mizutani, and Yoshihiro Yamanishi.
Systematic drug repositioning for a wide range of diseases with integrative analyses of phenotypic and molecular data.
J. Chem. Inf. Model., January 20 (2015).
[paper]
- Sayaka Mizutani, Yousuke Noro, Masaaki Kotera, and Susumu Goto.
Pharmacoepidemiological characterization of drug-inducedadverse reaction clusters towards understanding of their mechanisms.
Computational biology and chemistry, Jan 24 (2014).
[paper]
- Hiroaki Iwata, Sayaka Mizutani, Yasuo Tabei, Masaaki Kotera, Susumu Goto, and Yoshihiro Yamanishi.
Inferring protein domains associated with drug side effects based on drug-target interaction network.
BMC Syst Biol 7(S6), S18 (2013).
[paper]
- Sayaka Mizutani, Edouard Pauwels, Veronique Stoven, Susumu Goto, and Yoshihiro Yamanishi.
Relating drug-protein interaction network with drug side effects.
Bioinformatics 28, i522-i528 (2012).
[paper]
- Sayaka Mizutani, Michihiro Tanaka, Craig Wheelock, Minoru Kanehisa, and Susumu Goto.
Phylogenetic analysis of lipid mediator GPCRs.
Genome Informatics 24, 116-126 (2010).
[PubMed]
- Shawn Cokus, Sayaka Mizutani, and Matteo Pellegrini.
An improved method for identifying functionally linked proteins using phylogenetic profiles.
BMC Bioinformatics 8(S4), S7 (2007).
[paper]
Presentations (International)
- Mizutani S, Shiroma H, Yachida S, Yamada T
Metabolic shifts along the colorectal adenoma-carcinoma sequence.
International Human Microbiome Consortium (IHMC) 7th Congress, Ireland, June 2018 (Poster)
- Mizutani S, Nishimoto Y, Nakajima T, Hosoda F, Watanabe H, Saito Y, Shibata T, Yachida S, Yamada T
High stability of faecal microbiome composition in guanidine thiocyanate solution at room temperature and robustness during colonoscopy.
International Human Microbiome Consortium (IHMC) 6th Congress, USA, November 2016 (Poster)
- Sayaka Mizutani
Pharmacoepidemiological characterization of drug-induced adverse reaction clusters towards understanding of their mechanisms.
International Symposium on Bioinformatics and its Application, Tokyo, September 2014 (Invited)
- Sayaka Mizutani, Yousuke Noro, Masaaki Kotera and Susumu Goto
Pharmacoepidemiological characterization of drug-induced adverse reaction clusters towards understanding of their mechanisms.
The 12th Asia Pacific Bioinformatics Conference (APBC), China, January 2014 (Oral)
- Hiroaki Iwata, Sayaka Mizutani, Yasuo Tabei, Masaaki Kotera, Susumu Goto and Yoshihiro Yamanishi
Inferring protein domains associated with drug side effects based on drug-target interaction network.
The 24th International Conference on Genome Informatics (GIW), Singapore, December 2013 (Oral)
- Sayaka Mizutani, Edouard Pauwels, Veronique Stoven, Susumu Goto, and Yoshihiro Yamanishi
Relating drug-protein interaction network with drug side effects.
11th European Conference on Computational Biology (ECCB), Basel, Switzerland, September 2012 (Oral)
- Sayaka Mizutani, Toshiaki Tokimatsu, and Susumu Goto
Phylogenetic analysis of eicosanoid biosynthesis enzymes.
12th International Workshop on Bioinformatics and Systems Biology (IBSB), Boston, MA, USA, July 2012 (Oral)
- Sayaka Mizutani, Michihiro Tanaka, Craig Wheelock, Minoru Kanehisa, and Susumu Goto
Phylogenetic analysis of lipid mediator GPCRs.
10th Annual International Workshop on Bioinformatics and Systems Biology (IBSB), Kyoto, Japan, July 2010 (Oral)
- Shawn Cokus, Sayaka Mizutani, and Matteo Pellegrini
An improved method for identifying functionally linked proteins using phylogenetic profiles.
The 2nd Automated Function Prediction Meeting, La Jolla, CA, USA, August 2007 (Oral)
Presentations (Domestic)
- 水谷紗弥佳、城間博紹、谷内田真一、山田拓司
「腸内メタゲノム・メタボロームデータを用いた大腸がんの腸内細菌叢の解析」
第40回日本分子生物学会年会、神戸、2017年12月6日（ポスター発表）
- 水谷紗弥佳
「FDA有害事象自発報告データに基づく副作用の分類と特徴付け」
第42回毒性学会学術集会「毒性シミュレーションおよび毒性ビッグデータマイニングの創薬への活用」シンポジウム、金沢、2015年7月（招待講演）
- Sayaka Mizutani, Max Flöttmann, Marcus Krantz, Susumu Goto, and Edda Klipp
A Boolean network modeling of PI3K and MAPK pathways in combinatorial uses of cancer drugs.
2014年日本バイオインフォマティクス学会年会・第3回生命医薬情報学連合大会、仙台、2014年10月（ポスター発表）
- Sayaka Mizutani, Yousuke Noro, Masaaki Kotera, and Susumu Goto
A bioclustering approach to associating adverse drug events with the patients’ physiological backgrounds.
2013年日本バイオインフォマティクス学会年会・第２回生命医薬情報学連合大会、東京、2013年10月（ポスター発表）
- 水谷紗弥佳、Edouard Pauwels、Veronique Stoven、五斗進、山西芳裕
「薬剤標的タンパク質と副作用の関連解析のための統計手法」
第35回日本分子生物学会年会、福岡、2012年12月（ポスター発表）
- Sayaka Mizutani, Michihiro Tanaka, and Susumu Goto
Phylogenetic analysis of lipid mediator biosynthesis enzymes.
第34回日本分子生物学会年会、横浜、2011年12月（口頭発表）
- Sayaka Mizutani, Michihiro Tanaka, and Susumu Goto
Phylogenetic analysis of lipid mediator biosynthesis.
2011年日本バイオインフォマティクス学会年会・生命医薬情報学連合大会、神戸、2011年１1月（ポスター発表）
- Sayaka Mizutani, Wataru Honda, Masaaki Kotera, and Minoru Kanehisa
「アイテムセットマイニングを用いた大腸がんのマイクロアレイ解析」
2011年日本バイオインフォマティクス学会年会、大阪、2008年12月（ポスター発表）
Awards
- Sayaka Mizutani
Graduate Student Presentation Day, February 27, Institute for Chemical Research, Kyoto University, Kyoto, Japan
Oral Presentation Award
- Sayaka Mizutani, Yousuke Noro, Masaaki Kotera, and Susumu Goto.
Japanese Society for Bioinformatics (JSBi) 2013, October 29-31, Kyoto, Japan
Excellent Poster Award
