Enteropathway_info_E

  • HOME »
  • Enteropathway_info_E

» 日本語

About us
Enteropathway is a functional annotation database developed by the Yamada Laboratory of the School of Bioscience and Biotechnology at the Tokyo Institute of Technology, which contains more than 800 functional units (modules) and can be instantly explored with software that interactively visualises the relationships between genes and metabolites. Enteropathway is a database of gut bacteria-associated metabolic pathways, where the pathways are manually curated by researchers and linked to reference literature. It is useful for exploring basic metabolic pathways as well as for exploring new functions and for users to develop their own analyses.

Enteropathway is
Metabolic pathways which organized on a customizable web UI.

Original own data can be mapped to pathways and statistical analyses can be performed on the web.
Functional unit information is also downloadable and can be used for analyses carried out by users themselves.

Enteropathway is a publicly available software mainly open to academia.
The login function has also been added for more advanced research purposes.
-Available downloading visualised map on the Browser.
-Available downloading visualised data using the API.
-Available sharing the maps visualised on the Browser with unique URL.*4
-Available saving maps.
-Available downloading data.

The login function is required annually update. After a full year has passed, your account will be expired and re-registration will be requested.

Commercial use
If you wish to use Enteropathway for for profit-making purposes, you must conclude The Data Transfer Agreement with Tokyo Institute of Technology. Please contact us for details.

Enteropathway functions

functions Default Registers
Affiliation Academia*1 Corporate
Registration No required Register on the web*2 Contract with TokyoTech
Fees Free*3 Free Paid*3
Period one year update
Number of accounts 1 10maximum
Visualization of data on Browse ✔︎ ✔︎
Saving mapped data X ✔︎
Downloading visualised data on Browser X ✔︎
API Data visualisation X ✔︎
API Downloading visualised data X ✔︎
Sharing visualised map on browser with unique URL X ✔︎*4
Statistical processing (enrichment analysis) ✔︎ ✔︎
Downloading of all data (excluding figures) X ✔︎

*1 University students (including master’s and doctoral students) and non-profit academic research institutions.
*2 Acceptable e-mail address which domain can be recognized your affiliation. Not acceptable such as webmails.
*3 Commercial organisations are requested to pay for the use of the database.
The Data Transfer Agreement with Tokyo Tech will be concluded. Please contact us.
*4 Scheduled to start in March 2023.

Any use or redistribution of the data in whole or in part requires a clear statement of the source material (Enteropathway). Users who download the data are requested to cite the data in their publications in their articles. Please feel free to contact us if you have any questions.

 

Contact:Associate Professor Takuji Yamada
Yamada Laboratory, School of Bioscience and Biotechnology,
              Tokyo Institute of Technology
email    : info@jchm.jp

PAGETOP
Powered by WordPress & BizVektor Theme by Vektor,Inc. technology.